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UID:65@escience.washington.edu
DTSTART;TZID=America/Los_Angeles:20240208T163000
DTEND;TZID=America/Los_Angeles:20240208T172000
DTSTAMP:20240111T175831Z
URL:https://escience.washington.edu/events/uwdss-dorkenwald/
SUMMARY:UW Data Science Seminar: Sven Dorkenwald
DESCRIPTION:\n\nPlease join us for a UW Data Science Seminar on Thursday\, 
 February 8th from 4:30 to 5:20 p.m. PST. The seminar will feature Sven Dor
 kenwald\, a Shanahan Foundation Fellow with the Allen Institute and the Un
 iversity of Washington.\n\nThe seminar will be held in the Electrical &amp
 \; Computer Engineering Building (ECE)\, Room 105\n\n\n&nbsp\;\n"Reconstru
 cting the synaptic wiring diagram of the fruit fly brain"\nAbstract: Conne
 ctions between neurons can be mapped by acquiring and analyzing electron m
 icroscopic (EM) brain images. In recent years\, this approach has been app
 lied to chunks of brains to reconstruct local connectivity maps that are h
 ighly informative\, yet inadequate for understanding brain function more g
 lobally. We reconstructed the first neuronal wiring diagram of a whole adu
 lt brain\, containing 5×107 chemical synapses between ~139\,000 neurons r
 econstructed from a female Drosophila melanogaster. The resource also inco
 rporates annotations of cell classes and types\, nerves\, hemilineages\, a
 nd predictions of neurotransmitter identities. In this talk\, I will discu
 ss the technological progress in machine learning and computer systems tha
 t lead up to the creation of this resource. Further\, I will demonstrate i
 ts impact by highlighting how the connectome can be used to study the glob
 al organization of the brain and facilitates the tracing synaptic pathways
  from the inputs (e.g.\, sensory neurons) to outputs (e.g. descending neur
 ons). \n\nBio: Sven Dorkenwald joined the Allen Institute and the Universi
 ty of Washington as a Shanahan Fellow in September 2023. He received his u
 ndergraduate degree in Physics and a Masters degree in Computer Engineerin
 g at the University of Heidelberg in Germany. While in Heidelberg\, he wor
 ked on automated image analysis in connectomics with Jörgen Kornfeld in t
 he department of Winfried Denk at the Max Planck Institute for Medical Res
 earch. Sven received his Ph.D. in Computer Science and Neuroscience from P
 rinceton University\, where he worked with Sebastian Seung and Mala Murthy
 . During his PhD\, he developed approaches for the reconstruction and anal
 ysis of neuronal circuits from Electron Microscopy images and spearheaded 
 the FlyWire consortium effort that produced a synapse-resolution connectom
 e of an adult Drosophila brain. Concurrently\, Sven devised a self-supervi
 sed approach for efficient annotation of cell reconstructions as a student
  researcher at Google Research. As a Shanahan Fellow\, Sven is pursuing th
 e integration neuroscience datasets from multiple modalities.\nThe UW Dat
 a Science Seminar is an annual lecture series at the University of Washin
 gton that hosts scholars working across applied areas of data science\, su
 ch as the sciences\, engineering\, humanities and arts along with methodol
 ogical areas in data science\, such as computer science\, applied math and
  statistics. Our presenters come from all domain fields and include occasi
 onal external speakers from regional partners\, governmental agencies and 
 industry.\nThe 2023-2024 seminars will be held in person\, and are free an
 d open to the public.
LOCATION:Electrical and Computer Engineering Building\, Room 105\, 185 W St
 evens Way NE\, Seattle\, WA\, 98195\, United States
X-APPLE-STRUCTURED-LOCATION;VALUE=URI;X-ADDRESS=185 W Stevens Way NE\, Seat
 tle\, WA\, 98195\, United States;X-APPLE-RADIUS=100;X-TITLE=Electrical and
  Computer Engineering Building\, Room 105:geo:0,0
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DTSTART:20231105T010000
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